DICP OpenIR
Subject Area物理化学
Developing novel method and strategy for comprehensive glycoprotein analysis
Qiao XQ(乔晓强); Sun LL(孙良亮); Dan YC(单亦初); Zhang LH(张丽华); Zhang YK(张玉奎)
Conference Name全球第九届人类蛋白质组学会议
Conference Date2010-9-19
2010-09-19
Conference Place澳大利亚
Pages79/2
Department生物技术部
Funding OrganizationUniversity of New South Wales
AbstractGlycoprotein analysis has been paid increasing attention in the field of prognosis, diagnosis, and proteomics for the discovery of biomarkers. Although multiple selective enrichment methods have been developed, the complex and heterogeneous nature of glycosylation renders none of these methods could potentially cover all of the glycosylation information in complex biological samples. Accordingly, the development of new methods and strategies for comprehensive glycoprotein analysis is still an imperative task. I n our recent study, a global strategy was developed to perform large-scale glycoprotein profiling of rat brain by the pre-fractionation of proteins into soluble and insoluble ones. Soluble proteins were denatured by traditional urea protocol, and insoluble proteins were solubillized by the addition of 1% (v/v) 1-butyl-3- methylimidazolium tetrafluoroborate, which showed superiority than urea, methanol and RapiGest. Followed by hydraizde based enrichment, a total number of 1108 unique Nglycosites, covering 626 non-redundant glycoprotein groups were identified, among which 99% glycosites were not reported. For all glycoprotein groups, 399 proteins contained at least one predicted transmembrane domain. Furthermore, a novel enrichment method of glycopeptides by the chemical modification of bifunctional fluorescent tag, 8-aminonaphthalene- 1, 3, 6-trisulfonic acid disodium salt, was developed. After captured by TiO2, 39 unique Nlinked glycoproteins, representing of 53 unique Nlinked glycosites were identified via μRPLC-ESIMS/ MS for the analysis of human serum glycoproteins. In comparison to the direct capture by TiO2 and traditional hydraizde chemistry strategy, an overlap of less than 40% for glycosites was achieved, which indicated the complementary nature of this protocol with the previously developed methods.
Language中文
Document Type会议论文
Identifierhttp://cas-ir.dicp.ac.cn/handle/321008/114166
Collection中国科学院大连化学物理研究所
Corresponding AuthorZhang LH(张丽华)
Recommended Citation
GB/T 7714
Qiao XQ,Sun LL,Dan YC,et al. Developing novel method and strategy for comprehensive glycoprotein analysis[C],2010:79/2.
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