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Variation in One Residue Associated with the Metal Ion-Dependent Adhesion Site Regulates alpha IIb beta 3 Integrin Ligand Binding Affinity
Raborn, Joel1,5; Fu, Ting2,3,4; Wu, Xue2,3; Xiu, Zhilong3; Li, Guohui2; Luo, Bing-Hao1
刊名PLOS ONE
2013-10-08
DOI10.1371/journal.pone.0076793
8期:10
收录类别SCI
文章类型Article
WOS标题词Science & Technology
类目[WOS]Multidisciplinary Sciences
研究领域[WOS]Science & Technology - Other Topics
关键词[WOS]I-LIKE DOMAIN ; MOLECULAR-DYNAMICS ; STRUCTURAL BASIS ; CRYSTAL-STRUCTURE ; BETA(3) INTEGRIN ; ALPHA-SUBUNIT ; CELL-ADHESION ; FIRM ADHESION ; OUTSIDE-IN ; X-RAY
英文摘要The Asp of the RGD motif of the ligand coordinates with the beta I domain metal ion dependent adhesion site (MIDAS) divalent cation, emphasizing the importance of the MIDAS in ligand binding. There appears to be two distinct groups of integrins that differ in their ligand binding affinity and adhesion ability. These differences may be due to a specific residue associated with the MIDAS, particularly the beta 3 residue Ala(252) and corresponding Ala in the beta 1 integrin compared to the analogous Asp residue in the beta 2 and beta 7 integrins. Interestingly, mutations in the adjacent to MIDAS (ADMIDAS) of integrins alpha 4 beta 7 and alpha L beta 2 increased the binding and adhesion abilities compared to the wild-type, while the same mutations in the alpha 2 beta 1, alpha 5 beta 1, alpha V beta 3, and alpha IIb beta 3 integrins demonstrated decreased ligand binding and adhesion. We introduced a mutation in the alpha IIb beta 3 to convert this MIDAS associated Ala252 to Asp. By combination of this mutant with mutations of one or two ADMIDAS residues, we studied the effects of this residue on ligand binding and adhesion. Then, we performed molecular dynamics simulations on the wild-type and mutant alpha IIb beta 3 integrin beta I domains, and investigated the dynamics of metal ion binding sites in different integrin-RGD complexes. We found that the tendency of calculated binding free energies was in excellent agreement with the experimental results, suggesting that the variation in this MIDAS associated residue accounts for the differences in ligand binding and adhesion among different integrins, and it accounts for the conflicting results of ADMIDAS mutations within different integrins. This study sheds more light on the role of the MIDAS associated residue pertaining to ligand binding and adhesion and suggests that this residue may play a pivotal role in integrin-mediated cell rolling and firm adhesion.
语种英语
WOS记录号WOS:000325552200071
引用统计
被引频次:3[WOS]   [WOS记录]     [WOS相关记录]
文献类型期刊论文
条目标识符http://cas-ir.dicp.ac.cn/handle/321008/137682
专题中国科学院大连化学物理研究所
作者单位1.Louisiana State Univ, Dept Biol Sci, Baton Rouge, LA 70803 USA
2.Chinese Acad Sci, Dalian Inst Chem Phys, State Key Lab Mol React Dynam, Lab Mol Modeling & Design, Dalian, Peoples R China
3.Dalian Univ Technol, Dept Biosci & Biotechnol, Dalian, Peoples R China
4.Chinese Acad Sci, Grad Univ, Beijing, Peoples R China
5.Univ Alabama Birmingham, Med Sch Birmingham, Birmingham, AL USA
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GB/T 7714
Raborn, Joel,Fu, Ting,Wu, Xue,et al. Variation in One Residue Associated with the Metal Ion-Dependent Adhesion Site Regulates alpha IIb beta 3 Integrin Ligand Binding Affinity[J]. PLOS ONE,2013,8(10).
APA Raborn, Joel,Fu, Ting,Wu, Xue,Xiu, Zhilong,Li, Guohui,&Luo, Bing-Hao.(2013).Variation in One Residue Associated with the Metal Ion-Dependent Adhesion Site Regulates alpha IIb beta 3 Integrin Ligand Binding Affinity.PLOS ONE,8(10).
MLA Raborn, Joel,et al."Variation in One Residue Associated with the Metal Ion-Dependent Adhesion Site Regulates alpha IIb beta 3 Integrin Ligand Binding Affinity".PLOS ONE 8.10(2013).
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