DICP OpenIR
Subject Area物理化学
Quantitative characterization of histone post-translational modifications using a stable isotope dimethyl-labeling strategy
Han, Yanpu1; Lu, Congcong1; Zhang, Kai1,2,3; Tian, Shanshan2,3; Fan, Enguo4; Chen, Langxing1; He, Xiwen1; Zhang, Yukui1,5; Zhang K(张锴)
Source PublicationANALYTICAL METHODS
2015
DOI10.1039/c5ay00120j
Volume7Issue:9Pages:3779-3785
Indexed BySCI
SubtypeArticle
WOS HeadingsScience & Technology ; Physical Sciences ; Life Sciences & Biomedicine ; Technology
WOS SubjectChemistry, Analytical ; Food Science & Technology ; Spectroscopy
WOS Research AreaChemistry ; Food Science & Technology ; Spectroscopy
WOS KeywordMETHYLATION ; PROTEOMICS ; LANGUAGE ; MARKS
AbstractHistone post-translational modifications (PTMs) have been considered to be a major group of important epigenetic marks and play critical roles in the regulation of chromatin-templated biological processes. To date, novel strategies for the quantification of histone PTMs are still highly desirable. Herein, we present an efficient approach to quantitatively characterize histone PTMs using stable isotope dimethyl labeling coupled with mass spectrometry. At first, all of the 3-aminogroups of free lysines are derivatized by heavy formaldehyde to enable an easy distinction of free lysines from those of naturally occurring lysine-dimethylation upon MS analysis. After tryptic digestion, a second derivatization was applied with heavy- and light-stable isotope dimethyl labeling to label the N-termini of tryptic peptides from different sample sources. The mixture was further identified and quantified by HPLC-MS/MS. This method enables the comparison of histone PTMs from multiple sample sources and the quantification of different PTMs at certain amino-acid residues of histones in one single experiment. Thus, it is highly attractive for the identification of epigenetic histone marks.
Language英语
WOS IDWOS:000354042300020
Citation statistics
Document Type期刊论文
Identifierhttp://cas-ir.dicp.ac.cn/handle/321008/143692
Collection中国科学院大连化学物理研究所
Corresponding AuthorZhang K(张锴)
Affiliation1.Nankai Univ, Dept Chem, Tianjin 300071, Peoples R China
2.Tianjin Med Univ, Tianjin Key Lab Med Epigenet, Tianjin 300070, Peoples R China
3.Tianjin Med Univ, Sch Basic Med Sci, Tianjin 300070, Peoples R China
4.Univ Freiburg, Inst Biochem & Mol Biol, ZBMZ, D-79104 Freiburg, Germany
5.Chinese Acad Sci, Dalian Inst Chem Phys, Natl Chromatog Res & Anal Ctr, Dalian 116023, Peoples R China
Recommended Citation
GB/T 7714
Han, Yanpu,Lu, Congcong,Zhang, Kai,et al. Quantitative characterization of histone post-translational modifications using a stable isotope dimethyl-labeling strategy[J]. ANALYTICAL METHODS,2015,7(9):3779-3785.
APA Han, Yanpu.,Lu, Congcong.,Zhang, Kai.,Tian, Shanshan.,Fan, Enguo.,...&张锴.(2015).Quantitative characterization of histone post-translational modifications using a stable isotope dimethyl-labeling strategy.ANALYTICAL METHODS,7(9),3779-3785.
MLA Han, Yanpu,et al."Quantitative characterization of histone post-translational modifications using a stable isotope dimethyl-labeling strategy".ANALYTICAL METHODS 7.9(2015):3779-3785.
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