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Theoretical Studies on the Folding Mechanisms for Different DNA G-quadruplexes 期刊论文
ADVANCE IN STRUCTURAL BIOINFORMATICS, 2015, 卷号: 827, 页码: 123-141
Authors:  Wu, Xue;  Xu, Peijun;  Wang, Jinguang;  Xu, Yong;  Fu, Ting;  Zhao, Meixia;  Zhang, Depeng;  Liu, Jiahui;  Shen, Hujun;  Xiu, Zhilong;  Li, Guohui;  Wei, D;  Xu, Q;  Zhao, T;  Dai, H
Favorite  |  View/Download:60/0  |  Submit date:2015/11/17
G-quadruplex  Go-model  Fold  
Binding Modes and Interaction Mechanism Between Different Base Pairs and Methylene Blue Trihydrate: A Quantum Mechanics Study 期刊论文
ADVANCE IN STRUCTURAL BIOINFORMATICS, 2015, 卷号: 827, 页码: 187-203
Authors:  Xu, Peijun;  Wang, Jinguang;  Xu, Yong;  Chu, Huiying;  Shen, Hujun;  Zhang, Depeng;  Zhao, Meixia;  Liu, Jiahui;  Li, Guohui;  Wei, D;  Xu, Q;  Zhao, T;  Dai, H
Favorite  |  View/Download:69/0  |  Submit date:2015/11/17
Dna Base Pairs  Intercalators Methylene Blue Trihydrate  Quantum Mechanic Methods  Charge Density  
Folding Mechanisms of Trefoil Knot Proteins Studied by Molecular Dynamics Simulations and Go-model 期刊论文
ADVANCE IN STRUCTURAL BIOINFORMATICS, 2015, 卷号: 827, 页码: 93-110
Authors:  Wu, Xue;  Xu, Peijun;  Wang, Jinguang;  Xu, Yong;  Fu, Ting;  Zhang, Depeng;  Zhao, Meixia;  Liu, Jiahui;  Shen, Hujun;  Xiu, Zhilong;  Li, Guohui;  Wei, D;  Xu, Q;  Zhao, T;  Dai, H
Favorite  |  View/Download:86/0  |  Submit date:2015/11/17
Trefoil  Knot  High-temperature Unfolding  Go-model  Fold  
Advancement of Polarizable Force Field and Its Use for Molecular Modeling and Design 期刊论文
ADVANCE IN STRUCTURAL BIOINFORMATICS, 2015, 卷号: 827, 页码: 19-32
Authors:  Xu, Peijun;  Wang, Jinguang;  Xu, Yong;  Chu, Huiying;  Liu, Jiahui;  Zhao, Meixia;  Zhang, Depeng;  Mao, Yingchen;  Li, Beibei;  Ding, Yang;  Li, Guohui;  Wei, D;  Xu, Q;  Zhao, T;  Dai, H
Favorite  |  View/Download:73/0  |  Submit date:2015/11/17
Polarizable Force Field  Amoeba  Fluctuating Charge Model  Induced Point Dipole Model  Molecular Modeling